Also, if everything is “costed right” you may need to increase the suggested point limit of standard games from 40 to something else, as a fleet made of costed right ships might get you one or two ships in a fleet (without heavy crew combos) and max out your build total of 40.
I think it would balance out because of all the overpriced ships – I think there are probably more of those than the underpriced ships. For example, a ton of ships from Fire and Steel (and other “second half” of production sets) would suddenly drop into single digits for point cost. Something like USS Shark would go from 13 points of “bleh” to 5-6 points of intrigue.
Banshee’s Cry might go to 10 or more, but a bunch of ships of the same type (Crete Argentee, Repulsa, etc) would drop into single digits, which would compensate for the OP stuff getting more expensive.